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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH36639.1PFAM: Protein of unknown function DUF1486; KEGG: htu:Htur_3163 protein of unknown function DUF1486. (129 aa)    
Predicted Functional Partners:
AEH36641.1
UPF0293 protein; Probable pre-rRNA processing protein involved in ribosome biogenesis; Belongs to the TSR3 family.
       0.583
AEH36640.1
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: nmg:Nmag_1433 Rieske (2Fe-2S) iron-sulfur domain protein.
       0.546
AEH36638.1
PFAM: Aldehyde dehydrogenase; KEGG: hvo:HVO_B0371 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.460
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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