STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH36645.1KEGG: htu:Htur_3155 protein of unknown function DUF99; HAMAP: UPF0215 protein; PFAM: Protein of unknown function DUF99; Belongs to the UPF0215 family. (202 aa)    
Predicted Functional Partners:
AEH36646.1
KEGG: nmg:Nmag_1447 phage SPO1 DNA polymerase-related protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like.
       0.909
AEH36643.1
KEGG: htu:Htur_3157 beta-lactamase domain protein.
       0.899
AEH36644.1
KEGG: htu:Htur_3156 hypothetical protein.
       0.849
AEH37468.1
PFAM: Peptidyl-tRNA hydrolase, PTH2; TIGRFAM: Peptidyl-tRNA hydrolase, PTH2; HAMAP: Peptidyl-tRNA hydrolase; KEGG: htu:Htur_1472 aminoacyl-tRNA hydrolase.
 
     0.591
tiaS
Domain of unknown function DUF1743; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.
  
     0.580
hisH
Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
       0.551
AEH37161.1
tRNA ribose 2'-O-methyltransferase aTrm56; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family.
  
     0.545
AEH38100.1
UPF0218 protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).
 
     0.540
AEH38235.1
KEGG: htu:Htur_0753 nucleic acid-binding protein consists of a PIN domain and a Zn-ribbon module-like protein.
  
     0.516
AEH37367.1
Acylphosphatase; KEGG: htu:Htur_2447 acylphosphatase; HAMAP: Acylphosphatase; PFAM: Acylphosphatase-like.
       0.515
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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