Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH36739.1KEGG: nmg:Nmag_1230 putative transcriptional regulator, ArsR family. (306 aa)    
Predicted Functional Partners:
AEH37566.1
KEGG: htu:Htur_1547 ABC-type Na+ efflux pump permease component-like protein.
 
     0.718
AEH38321.1
PFAM: Type II secretion system F domain; KEGG: htu:Htur_1065 type II secretion system F domain protein.
  
     0.702
cetZ
Tubulin/FtsZ GTPase; Involved in cell shape control; Belongs to the CetZ family.
  
     0.701
AEH37565.1
KEGG: htu:Htur_1548 ABC-type Na+ efflux pump permease component-like protein.
 
     0.672
AEH37340.1
KEGG: htu:Htur_2108 hypothetical protein.
  
     0.671
AEH36962.1
PFAM: Oligosaccharyl transferase, STT3 subunit; KEGG: htu:Htur_2957 oligosaccharyl transferase STT3 subunit.
  
     0.669
AEH38315.1
KEGG: htu:Htur_1059 hypothetical protein.
  
     0.640
AEH38471.1
PFAM: Exosortase EpsH-related; KEGG: htu:Htur_1309 exosortase EpsH-related protein.
  
    0.620
AEH38744.1
KEGG: nmg:Nmag_1165 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase.
  
    0.613
AEH36422.1
KEGG: htu:Htur_0453 superfamily II helicase-like protein.
  
     0.610
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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