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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH36764.1KEGG: htu:Htur_3102 hypothetical protein. (367 aa)    
Predicted Functional Partners:
AEH37009.1
PFAM: Ferritin/Dps protein; KEGG: htu:Htur_2771 ferritin Dps family protein.
  
     0.668
AEH35909.1
KEGG: nmg:Nmag_1841 hypothetical protein.
  
     0.611
AEH38717.1
KEGG: htu:Htur_2637 metal-dependent phosphoesterase (PHP family)-like protein.
  
     0.571
AEH35739.1
PFAM: Protein of unknown function DUF447; KEGG: htu:Htur_1890 protein of unknown function DUF447.
  
     0.516
AEH36763.1
KEGG: nmg:Nmag_2628 hypothetical protein.
       0.483
eif5a
Translation initiation factor 5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
       0.453
AEH36766.1
Agmatinase; KEGG: nmg:Nmag_1206 agmatinase; PFAM: Ureohydrolase; Belongs to the arginase family.
       0.453
AEH37218.1
PFAM: Cupin 2, conserved barrel; KEGG: htu:Htur_0912 cupin 2 conserved barrel domain protein.
  
     0.408
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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