Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH36780.1HhH-GPD family protein; KEGG: hvo:HVO_2834 A/G-specific adenine glycosylase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SMART: HhH-GPD domain. (223 aa)    
Predicted Functional Partners:
AEH35737.1
KEGG: nmg:Nmag_0037 HhH-GPD family protein; PFAM: HhH-GPD domain; SMART: HhH-GPD domain.
  
  
 
0.913
pcn
DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication.
   
 
 0.713
AEH36779.1
Hypothetical protein.
       0.444
AEH37348.1
KEGG: nmg:Nmag_0633 hypothetical protein.
      
 0.438
AEH36151.1
PFAM: Ammonium transporter; Nitrogen regulatory protein PII; KEGG: htu:Htur_0187 ammonium transporter; Belongs to the P(II) protein family.
     
 0.431
AEH36646.1
KEGG: nmg:Nmag_1447 phage SPO1 DNA polymerase-related protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like.
      
 0.418
AEH37778.1
Manually curated; KEGG: nmg:Nmag_3342 uracil-DNA glycosylase superfamily.
      
 0.418
uppS
Undecaprenyl pyrophosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
 
     0.400
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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