STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH36786.1KEGG: htu:Htur_1586 hypothetical protein. (277 aa)    
Predicted Functional Partners:
AEH36785.1
PFAM: Sodium/calcium exchanger membrane region; KEGG: htu:Htur_2005 sodium/calcium exchanger membrane region.
       0.707
AEH35887.1
KEGG: nmg:Nmag_1862 putative membrane associated potassium channel.
  
     0.635
AEH36787.1
KEGG: htu:Htur_0251 membrane protein-like protein.
       0.623
AEH37795.1
PFAM: Protein of unknown function DUF2243, membrane; KEGG: htu:Htur_1484 hypothetical protein.
  
     0.537
AEH35341.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: htu:Htur_0370 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.493
AEH36784.1
KEGG: htu:Htur_3133 malate dehydrogenase (acceptor); PFAM: FAD dependent oxidoreductase.
 
     0.476
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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