Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH36847.1KEGG: htu:Htur_2704 phytoene desaturase; TIGRFAM: Zeta-phytoene desaturase; PFAM: Amine oxidase. (495 aa)    
Predicted Functional Partners:
AEH36846.1
PFAM: UbiA prenyltransferase; KEGG: htu:Htur_2703 UbiA prenyltransferase.
 
 
 0.999
AEH36845.1
KEGG: htu:Htur_2702 carotene biosynthesis associated membrane protein; TIGRFAM: Carotene biosynthesis associated membrane protein, type-2; PFAM: Protein of unknown function DUF422.
 
  
 0.998
AEH36843.1
KEGG: htu:Htur_2699 phytoene synthase; PFAM: Squalene/phytoene synthase.
  
 0.993
AEH37862.1
TIGRFAM: Lycopene cyclase region; KEGG: nph:NP0652A lycopene cyclase.
 
   
 0.936
AEH37258.1
PFAM: Squalene/phytoene synthase; KEGG: nmg:Nmag_2309 squalene/phytoene synthase.
 
  
 0.816
AEH37394.1
Magnesium chelatase; PFAM: von Willebrand factor, type A; Magnesium chelatase, ChlI subunit; KEGG: htu:Htur_1006 von Willebrand factor type A; SMART: von Willebrand factor, type A.
 
  
 0.694
AEH38249.1
KEGG: htu:Htur_0774 isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase domain.
 
  
 0.636
AEH37521.1
Digeranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
 
  
 0.584
AEH37821.1
PFAM: UbiA prenyltransferase; KEGG: hje:HacjB3_07665 prenyltransferase.
 
  
 0.501
AEH37978.1
KEGG: nmg:Nmag_0575 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal.
 
  
 0.489
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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