Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH36893.1KEGG: htu:Htur_2788 hypothetical protein. (209 aa)    
Predicted Functional Partners:
AEH36051.1
TIGRFAM: Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; KEGG: nmg:Nmag_1929 small GTP-binding protein; SMART: ATPase, AAA+ type, core.
    
 0.689
rps13
Ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family.
  
    0.545
AEH36892.1
PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_2789 bacterio-opsin activator HTH domain protein.
       0.508
AEH36891.1
PFAM: Phosphoribosyltransferase; KEGG: nmg:Nmag_0958 phosphoribosyltransferase.
 
     0.473
AEH38552.1
PFAM: Peptidase M48, Ste24p; KEGG: htu:Htur_0890 peptidase M48 Ste24p.
    
 
 0.429
rpl32e
PFAM: Ribosomal protein L32e; KEGG: nmg:Nmag_0227 ribosomal protein L32e; Belongs to the eukaryotic ribosomal protein eL32 family.
  
 
 0.405
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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