STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH37445.1KEGG: htu:Htur_2096 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00341; PFAM: Protein of unknown function DUF389. (438 aa)    
Predicted Functional Partners:
AEH35997.1
KEGG: nmg:Nmag_1793 phosphodiesterase, MJ0936 family; TIGRFAM: Uncharacterised protein family UPF0025; PFAM: Metallophosphoesterase.
 
   
 0.674
engB
GTP-binding protein engB; Necessary for normal cell division and for the maintenance of normal septation.
 
     0.608
AEH38257.1
PFAM: Protein of unknown function DUF541; KEGG: nmg:Nmag_2733 protein of unknown function DUF541.
       0.552
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
       0.534
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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