Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH37934.1KEGG: nmg:Nmag_3590 AAA ATPase containing von Willebrand factor type A (vWA) domain-like. (661 aa)    
Predicted Functional Partners:
AEH37933.1
KEGG: htu:Htur_1805 Zn-dependent hydrolase of the beta-lactamase fold-like protein.
       0.801
AEH37935.1
KEGG: htu:Htur_1807 hypothetical protein.
       0.800
AEH38850.1
PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_1952 bacterio-opsin activator HTH domain protein.
  
     0.574
AEH36931.1
KEGG: htu:Htur_2959 Cdc6-related protein AAA superfamily ATPase-like protein.
  
     0.573
AEH37204.1
KEGG: htu:Htur_0926 hypothetical protein.
  
     0.561
AEH36023.1
GAF domain protein; PFAM: GAF; KEGG: htu:Htur_0028 putative phytochrome sensor protein.
  
     0.547
AEH38399.1
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: hvo:HVO_B0328 ABC-type transport system periplasmic substrate-binding protein (probable substrate dipeptides/oligopeptides).
  
     0.542
AEH37543.1
KEGG: htu:Htur_0983 hypothetical protein.
  
     0.536
AEH35514.1
KEGG: htu:Htur_2059 hypothetical protein.
  
     0.529
AEH37812.1
PFAM: Bacterio-opsin activator, HTH; KEGG: htu:Htur_1655 bacterio-opsin activator HTH domain protein.
  
     0.512
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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