Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH38200.1SMART: Transcription regulator, AsnC-type; KEGG: htu:Htur_0717 putative transcriptional regulator, AsnC family. (157 aa)    
Predicted Functional Partners:
AEH37434.1
KEGG: htu:Htur_1446 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type, C-terminal; Transcriptional regulator IclR, N-terminal; SMART: Transcription regulator, AsnC-type.
  
   
 0.598
AEH38201.1
KEGG: htu:Htur_0716 hypothetical protein.
       0.535
AEH38202.1
tRNA-guanine transglycosylase, various specificities; TIGRFAM: Queuine/other tRNA-ribosyltransferase; Uncharacterised domain 2; PFAM: Pseudouridine synthase/archaeosine transglycosylase; Queuine/other tRNA-ribosyltransferase; KEGG: nmg:Nmag_2683 tRNA-guanine transglycosylase, various specificities; SMART: Pseudouridine synthase/archaeosine transglycosylase.
 
    0.504
AEH38199.1
KEGG: htu:Htur_0718 hypothetical protein.
       0.459
AEH36790.1
KEGG: htu:Htur_2297 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type, C-terminal; HTH transcriptional regulator, ArsR; SMART: Transcription regulator, AsnC-type.
  
   
 0.434
AEH36656.1
KEGG: nmg:Nmag_1460 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type, C-terminal; HTH transcriptional regulator, ArsR; SMART: Transcription regulator, AsnC-type.
  
   
 0.404
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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