Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH38705.1KEGG: htu:Htur_2626 4-oxalocrotonate tautomerase. (132 aa)    
Predicted Functional Partners:
AEH38704.1
PFAM: Major facilitator superfamily MFS-1; KEGG: htu:Htur_2625 major facilitator superfamily MFS_1.
       0.576
AEH38793.1
TOBE domain-containing protein; PFAM: Transport-associated OB, type 1; HTH transcriptional regulator, LysR; KEGG: htu:Htur_2293 putative transcriptional regulator, ModE family.
   
    0.535
AEH38703.1
PFAM: UspA; KEGG: htu:Htur_2624 UspA domain protein.
       0.465
AEH38706.1
KEGG: hut:Huta_1309 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE.
       0.428
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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