Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEH38865.1KEGG: nmg:Nmag_0288 hypothetical protein. (607 aa)    
Predicted Functional Partners:
AEH38867.1
KEGG: nmg:Nmag_0286 hypothetical protein.
       0.780
AEH38866.1
KEGG: nmg:Nmag_0287 hypothetical protein.
       0.779
AEH38869.1
KEGG: nmg:Nmag_0283 hypothetical protein.
       0.777
AEH38868.1
Phosphoesterase PA-phosphatase related protein; KEGG: hbo:Hbor_29520 PAP2 superfamily protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase.
       0.773
AEH38864.1
KEGG: nmg:Nmag_0289 hypothetical protein.
       0.727
AEH38863.1
KEGG: htu:Htur_1962 hypothetical protein.
       0.514
AEH38870.1
KEGG: nmg:Nmag_0282 hypothetical protein.
       0.479
Your Current Organism:
Halopiger xanaduensis
NCBI taxonomy Id: 797210
Other names: H. xanaduensis SH-6, Halopiger xanaduensis JCM 14033, Halopiger xanaduensis SH-6, Halopiger xanaduensis str. SH-6, Halopiger xanaduensis strain SH-6
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