STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS46074.1tRNA 2-thiouridine synthesizing protein A. (82 aa)    
Predicted Functional Partners:
SDS72663.1
Cysteine desulfurase IscS.
   
 0.969
SDS15652.1
tRNA 2-thiouridine synthesizing protein D.
 
 
 0.934
SDR86735.1
TusA-related sulfurtransferase; Belongs to the sulfur carrier protein TusA family.
  
  
 
0.639
cysN
Adenylylsulfate kinase /sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.638
SDS00760.1
Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
 
  
 0.605
SDS87002.1
CDP-4-dehydro-6-deoxyglucose reductase.
    
 0.600
SDS46117.1
Heme-degrading monooxygenase HmoA.
       0.592
SDS92487.1
Indolepyruvate ferredoxin oxidoreductase.
    
  0.588
SDR70765.1
Adenylyltransferase and sulfurtransferase.
    
 0.576
SDS22307.1
FAD/FMN-containing dehydrogenase.
   
  0.572
Your Current Organism:
Pseudomonas litoralis
NCBI taxonomy Id: 797277
Other names: CECT 7670, KCTC 23093, P. litoralis, Pseudomonas litoralis Pascual et al. 2012, Pseudomonas sp. 2SM5, Pseudomonas sp. 2SM6, strain 2SM5
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