AHF98278.1 protein (Halostagnicola larsenii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AHF98278.1

Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)

Predicted Functional Partners:

AHG00693.1

0.991

AHF98279.1

0.980

AHF98280.1

0.980

AHG00694.1

0.964

AHF99238.1

0.912

AHF99240.1

0.593

AHF99239.1

0.573

AHF98568.1

0.482

AHF98846.1

0.400

Your Current Organism:

Halostagnicola larsenii

NCBI taxonomy Id: 797299
Other names: H. larsenii XH-48, Halostagnicola larsenii JCM 13463, Halostagnicola larsenii XH-48, Halostagnicola larsenii str. XH-48, Halostagnicola larsenii strain XH-48

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHF98278.1	AHF98279.1	HALLA_04700	HALLA_04705	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
AHF98278.1	AHF98280.1	HALLA_04700	HALLA_04720	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
AHF98278.1	AHF98568.1	HALLA_04700	HALLA_06625	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	D-gluconate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.482
AHF98278.1	AHF98846.1	HALLA_04700	HALLA_08195	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
AHF98278.1	AHF99238.1	HALLA_04700	HALLA_10615	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
AHF98278.1	AHF99239.1	HALLA_04700	HALLA_10620	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
AHF98278.1	AHF99240.1	HALLA_04700	HALLA_10625	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.593
AHF98278.1	AHG00693.1	HALLA_04700	HALLA_04710	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.991
AHF98278.1	AHG00694.1	HALLA_04700	HALLA_04715	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.964
AHF98279.1	AHF98278.1	HALLA_04705	HALLA_04700	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
AHF98279.1	AHF98280.1	HALLA_04705	HALLA_04720	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AHF98279.1	AHF99238.1	HALLA_04705	HALLA_10615	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
AHF98279.1	AHF99239.1	HALLA_04705	HALLA_10620	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
AHF98279.1	AHF99240.1	HALLA_04705	HALLA_10625	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
AHF98279.1	AHG00693.1	HALLA_04705	HALLA_04710	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.998
AHF98279.1	AHG00694.1	HALLA_04705	HALLA_04715	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.990
AHF98280.1	AHF98278.1	HALLA_04720	HALLA_04700	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
AHF98280.1	AHF98279.1	HALLA_04720	HALLA_04705	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AHF98280.1	AHF99238.1	HALLA_04720	HALLA_10615	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
AHF98280.1	AHF99239.1	HALLA_04720	HALLA_10620	Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.934

page 1 of 3

Server load: medium (58%) [HD]

Permalink

Network

Neighborhood

Databases

Fusion

Textmining

Cooccurrence

Experiments

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About