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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF98985.1Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)    
Predicted Functional Partners:
AHF98984.1
ATP-NAD kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.674
AHG00619.1
GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.642
AHF99087.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.582
AHF98986.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.521
AHG00116.1
Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.499
AHF98996.1
NADH-quinone oxidoreductase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.466
atpE
ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
 0.466
AHF98353.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.462
AHF99675.1
methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.436
AHF98987.1
DHH family phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.431
Your Current Organism:
Halostagnicola larsenii
NCBI taxonomy Id: 797299
Other names: H. larsenii XH-48, Halostagnicola larsenii JCM 13463, Halostagnicola larsenii XH-48, Halostagnicola larsenii str. XH-48, Halostagnicola larsenii strain XH-48
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