STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF99225.1Carbamoyl phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (611 aa)    
Predicted Functional Partners:
AHF99227.1
methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
AHG00498.1
Branched-chain alpha-keto acid dehydrogenase subunit E2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.995
AHG00015.1
biotin--acetyl-CoA-carboxylase ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.987
AHF98965.1
propionyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.977
AHF98879.1
2-isopropylmalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.964
AHF99226.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.961
AHF99278.1
Citrate lyase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.942
AHF98284.1
3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.937
AHF98524.1
acetyl-CoA acetyltransferase; Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.937
AHF98805.1
3-ketoacyl-CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.937
Your Current Organism:
Halostagnicola larsenii
NCBI taxonomy Id: 797299
Other names: H. larsenii XH-48, Halostagnicola larsenii JCM 13463, Halostagnicola larsenii XH-48, Halostagnicola larsenii str. XH-48, Halostagnicola larsenii strain XH-48
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