Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHF99454.1 | AHF99455.1 | HALLA_12335 | HALLA_12340 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | H/ACA RNA-protein complex protein Gar1; Functions in a trimeric complex to guide RNA-target RNA complexes for the purposes of pseudouridylation; box H/ACA RNA-protein particle consists of Cbf5p, Nop10p and Gar1 along with the guide RNA and ribosomal protein L7Ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.601 |
| AHF99454.1 | AHF99457.1 | HALLA_12335 | HALLA_12350 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
| AHF99454.1 | srp19 | HALLA_12335 | HALLA_12345 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP. | 0.601 |
| AHF99455.1 | AHF99454.1 | HALLA_12340 | HALLA_12335 | H/ACA RNA-protein complex protein Gar1; Functions in a trimeric complex to guide RNA-target RNA complexes for the purposes of pseudouridylation; box H/ACA RNA-protein particle consists of Cbf5p, Nop10p and Gar1 along with the guide RNA and ribosomal protein L7Ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.601 |
| AHF99455.1 | AHF99457.1 | HALLA_12340 | HALLA_12350 | H/ACA RNA-protein complex protein Gar1; Functions in a trimeric complex to guide RNA-target RNA complexes for the purposes of pseudouridylation; box H/ACA RNA-protein particle consists of Cbf5p, Nop10p and Gar1 along with the guide RNA and ribosomal protein L7Ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.572 |
| AHF99455.1 | AHF99581.1 | HALLA_12340 | HALLA_13055 | H/ACA RNA-protein complex protein Gar1; Functions in a trimeric complex to guide RNA-target RNA complexes for the purposes of pseudouridylation; box H/ACA RNA-protein particle consists of Cbf5p, Nop10p and Gar1 along with the guide RNA and ribosomal protein L7Ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleolar; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.839 |
| AHF99455.1 | AHG00471.1 | HALLA_12340 | HALLA_18390 | H/ACA RNA-protein complex protein Gar1; Functions in a trimeric complex to guide RNA-target RNA complexes for the purposes of pseudouridylation; box H/ACA RNA-protein particle consists of Cbf5p, Nop10p and Gar1 along with the guide RNA and ribosomal protein L7Ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.618 |
| AHF99455.1 | guaAB | HALLA_12340 | HALLA_08755 | H/ACA RNA-protein complex protein Gar1; Functions in a trimeric complex to guide RNA-target RNA complexes for the purposes of pseudouridylation; box H/ACA RNA-protein particle consists of Cbf5p, Nop10p and Gar1 along with the guide RNA and ribosomal protein L7Ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.714 |
| AHF99455.1 | pyrG | HALLA_12340 | HALLA_08760 | H/ACA RNA-protein complex protein Gar1; Functions in a trimeric complex to guide RNA-target RNA complexes for the purposes of pseudouridylation; box H/ACA RNA-protein particle consists of Cbf5p, Nop10p and Gar1 along with the guide RNA and ribosomal protein L7Ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.620 |
| AHF99455.1 | rpl7ae | HALLA_12340 | HALLA_13960 | H/ACA RNA-protein complex protein Gar1; Functions in a trimeric complex to guide RNA-target RNA complexes for the purposes of pseudouridylation; box H/ACA RNA-protein particle consists of Cbf5p, Nop10p and Gar1 along with the guide RNA and ribosomal protein L7Ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L7; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.979 |
| AHF99455.1 | srp19 | HALLA_12340 | HALLA_12345 | H/ACA RNA-protein complex protein Gar1; Functions in a trimeric complex to guide RNA-target RNA complexes for the purposes of pseudouridylation; box H/ACA RNA-protein particle consists of Cbf5p, Nop10p and Gar1 along with the guide RNA and ribosomal protein L7Ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP. | 0.818 |
| AHF99455.1 | tmcA | HALLA_12340 | HALLA_13955 | H/ACA RNA-protein complex protein Gar1; Functions in a trimeric complex to guide RNA-target RNA complexes for the purposes of pseudouridylation; box H/ACA RNA-protein particle consists of Cbf5p, Nop10p and Gar1 along with the guide RNA and ribosomal protein L7Ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA(Met) cytidine acetyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of tRNA(Met), by using acetyl-CoA as an acetyl donor and ATP (or GTP). | 0.635 |
| AHF99455.1 | truB | HALLA_12340 | HALLA_15705 | H/ACA RNA-protein complex protein Gar1; Functions in a trimeric complex to guide RNA-target RNA complexes for the purposes of pseudouridylation; box H/ACA RNA-protein particle consists of Cbf5p, Nop10p and Gar1 along with the guide RNA and ribosomal protein L7Ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. | 0.994 |
| AHF99457.1 | AHF99454.1 | HALLA_12350 | HALLA_12335 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
| AHF99457.1 | AHF99455.1 | HALLA_12350 | HALLA_12340 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | H/ACA RNA-protein complex protein Gar1; Functions in a trimeric complex to guide RNA-target RNA complexes for the purposes of pseudouridylation; box H/ACA RNA-protein particle consists of Cbf5p, Nop10p and Gar1 along with the guide RNA and ribosomal protein L7Ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.572 |
| AHF99457.1 | srp19 | HALLA_12350 | HALLA_12345 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP. | 0.572 |
| AHF99581.1 | AHF99455.1 | HALLA_13055 | HALLA_12340 | Nucleolar; Derived by automated computational analysis using gene prediction method: Protein Homology. | H/ACA RNA-protein complex protein Gar1; Functions in a trimeric complex to guide RNA-target RNA complexes for the purposes of pseudouridylation; box H/ACA RNA-protein particle consists of Cbf5p, Nop10p and Gar1 along with the guide RNA and ribosomal protein L7Ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.839 |
| AHF99581.1 | AHG00471.1 | HALLA_13055 | HALLA_18390 | Nucleolar; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.951 |
| AHF99581.1 | guaAB | HALLA_13055 | HALLA_08755 | Nucleolar; Derived by automated computational analysis using gene prediction method: Protein Homology. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.821 |
| AHF99581.1 | pyrG | HALLA_13055 | HALLA_08760 | Nucleolar; Derived by automated computational analysis using gene prediction method: Protein Homology. | CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.680 |
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