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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF99667.1Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (780 aa)    
Predicted Functional Partners:
AHF99773.1
Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.869
AHG01126.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.824
AHG00108.1
Spermine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.646
dnaK
Molecular chaperone DnaK; Acts as a chaperone.
  
 
 0.621
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
 
  
 0.615
AHF99664.1
Heavy-metal transporting CPx-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.603
AHF99011.1
Heavy-metal transporting CPx-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.601
AHF98957.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.596
gap
Glyceraldehyde-3-phosphate dehydrogenase; Catalyzes the formation of 3-phospho-D-glycerol phosphate from D-glyceraldehyde 3-phosphate in glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.595
AHF99591.1
Sodium:sulfate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.583
Your Current Organism:
Halostagnicola larsenii
NCBI taxonomy Id: 797299
Other names: H. larsenii XH-48, Halostagnicola larsenii JCM 13463, Halostagnicola larsenii XH-48, Halostagnicola larsenii str. XH-48, Halostagnicola larsenii strain XH-48
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