STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF99674.1N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)    
Predicted Functional Partners:
AHF99675.1
methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.870
AHG01037.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
AHF98338.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.713
AHF98317.1
Nitrogen-fixing protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.705
AHG00410.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.665
AHF98774.1
methylated-DNA--protein-cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.663
AHF99673.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.662
AHF98640.1
N-acetyltransferase GCN5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.638
AHF99603.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.638
AHF98787.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.634
Your Current Organism:
Halostagnicola larsenii
NCBI taxonomy Id: 797299
Other names: H. larsenii XH-48, Halostagnicola larsenii JCM 13463, Halostagnicola larsenii XH-48, Halostagnicola larsenii str. XH-48, Halostagnicola larsenii strain XH-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.