STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF99829.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)    
Predicted Functional Partners:
AHG00664.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.778
AHF99641.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.735
AHF99647.1
Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.674
AHG00401.1
Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.634
AHF99830.1
Lycopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.597
AHG00018.1
TrmB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.562
AHF98317.1
Nitrogen-fixing protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.561
AHF99674.1
N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
AHF99603.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.511
AHF99636.1
Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.504
Your Current Organism:
Halostagnicola larsenii
NCBI taxonomy Id: 797299
Other names: H. larsenii XH-48, Halostagnicola larsenii JCM 13463, Halostagnicola larsenii XH-48, Halostagnicola larsenii str. XH-48, Halostagnicola larsenii strain XH-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.