close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF99903.1Uracil DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)    
Predicted Functional Partners:
AHF99902.1
Bacterio-opsin activator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.736
AHF99859.1
Flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.540
AHF98338.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.537
AHG00459.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.495
AHF98640.1
N-acetyltransferase GCN5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
AHF99086.1
Phycocyanobilin lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.488
AHG00498.1
Branched-chain alpha-keto acid dehydrogenase subunit E2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.484
AHG00410.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
AHF98466.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
AHF99674.1
N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
Your Current Organism:
Halostagnicola larsenii
NCBI taxonomy Id: 797299
Other names: H. larsenii XH-48, Halostagnicola larsenii JCM 13463, Halostagnicola larsenii XH-48, Halostagnicola larsenii str. XH-48, Halostagnicola larsenii strain XH-48
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.