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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHG00247.1Di-trans,poly-cis-decaprenylcistransferase / (Z)-prenyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)    
Predicted Functional Partners:
AHF99721.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.
 
 
 0.957
AHG00265.1
Isopentenyl pyrophosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.
 
 
 0.957
AHF98959.1
Farnesyl-diphosphate farnesyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.824
AHG00079.1
Geranylgeranyl-diphosphate geranylgeranyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.824
AHG00382.1
Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.799
nusA
Transcription elongation factor NusA; Participates in transcription termination. Belongs to the NusA family.
  
    0.663
AHG00246.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.618
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
  
 0.615
pyrG
CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
  
    0.568
AHG00377.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.559
Your Current Organism:
Halostagnicola larsenii
NCBI taxonomy Id: 797299
Other names: H. larsenii XH-48, Halostagnicola larsenii JCM 13463, Halostagnicola larsenii XH-48, Halostagnicola larsenii str. XH-48, Halostagnicola larsenii strain XH-48
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