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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHG00620.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)    
Predicted Functional Partners:
AHG00619.1
GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.950
AHG00621.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.935
AHG00018.1
TrmB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
cofC
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
  
     0.733
AHG00339.1
Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.726
AHF98844.1
Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.716
AHF98722.1
Exosortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
AHF98946.1
Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.692
AHF99769.1
DNA-directed RNA polymerase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
AHF99856.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.689
Your Current Organism:
Halostagnicola larsenii
NCBI taxonomy Id: 797299
Other names: H. larsenii XH-48, Halostagnicola larsenii JCM 13463, Halostagnicola larsenii XH-48, Halostagnicola larsenii str. XH-48, Halostagnicola larsenii strain XH-48
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