STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHG00683.1Acylaminoacyl-peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (697 aa)    
Predicted Functional Partners:
AHG00684.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.573
AHG00617.1
Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.555
AHF99540.1
Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.513
AHF98465.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.499
AHG00682.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.450
AHG00685.1
Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.431
AHF98985.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.427
AHF98695.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.415
Your Current Organism:
Halostagnicola larsenii
NCBI taxonomy Id: 797299
Other names: H. larsenii XH-48, Halostagnicola larsenii JCM 13463, Halostagnicola larsenii XH-48, Halostagnicola larsenii str. XH-48, Halostagnicola larsenii strain XH-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.