STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHG00688.1Potassium transporter TrkH; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)    
Predicted Functional Partners:
AHF99773.1
Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.983
AHF98606.1
Potassium transporter Trk; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.956
AHF99922.1
Potassium transporter Trk; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.947
AHF98807.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.856
AHF98996.1
NADH-quinone oxidoreductase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.650
AHG00033.1
Cytochrome C oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
     
 0.600
AHF99591.1
Sodium:sulfate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.499
AHG00687.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.458
AHF99819.1
Sodium/hydrogen exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.448
AHF98328.1
Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P(II) protein family.
 
  
 0.415
Your Current Organism:
Halostagnicola larsenii
NCBI taxonomy Id: 797299
Other names: H. larsenii XH-48, Halostagnicola larsenii JCM 13463, Halostagnicola larsenii XH-48, Halostagnicola larsenii str. XH-48, Halostagnicola larsenii strain XH-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.