Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB14660.1PFAM: Uncharacterized protein conserved in archaea (DUF2073). (130 aa)    
Predicted Functional Partners:
AGB14659.1
PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain.
 
   
 0.994
AGB14661.1
PFAM: Zn-ribbon containing protein (DUF2072).
 
   
 0.985
cofC
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
  
     0.746
AGB16057.1
Putative transcriptional regulator, contains C-terminal CBS domains; PFAM: Domain of unknown function.
  
     0.737
AGB17003.1
ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase; PFAM: ACT domain.
  
     0.736
secE
Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.722
AGB15370.1
Putative membrane protein; PFAM: Transmembrane exosortase (Exosortase_EpsH).
  
     0.718
AGB15118.1
PFAM: Protein of unknown function (DUF552).
  
     0.717
AGB16480.1
Putative acyltransferase; PFAM: Protein of unknown function, DUF583.
  
     0.712
AGB14663.1
Hypothetical protein.
       0.711
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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