Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB14661.1PFAM: Zn-ribbon containing protein (DUF2072). (249 aa)    
Predicted Functional Partners:
AGB14660.1
PFAM: Uncharacterized protein conserved in archaea (DUF2073).
 
   
 0.985
AGB14659.1
PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain.
 
   
 0.979
AGB16480.1
Putative acyltransferase; PFAM: Protein of unknown function, DUF583.
  
     0.742
AGB15118.1
PFAM: Protein of unknown function (DUF552).
  
     0.727
AGB16364.1
Hypothetical protein.
  
     0.723
AGB17168.1
Hypothetical protein.
  
     0.723
AGB16040.1
PFAM: Membrane protein of unknown function DUF63.
  
     0.717
AGB15370.1
Putative membrane protein; PFAM: Transmembrane exosortase (Exosortase_EpsH).
  
     0.713
secE
Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.711
AGB16662.1
PFAM: Integral membrane protein DUF106.
  
     0.704
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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