Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB14704.1Putative transcriptional regulator. (149 aa)    
Predicted Functional Partners:
AGB15303.1
Transposase; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.639
AGB17199.1
PFAM: Fic/DOC family; TIGRFAM: death-on-curing family protein.
  
     0.623
AGB17145.1
Hypothetical protein.
  
     0.590
AGB16943.1
Hypothetical protein; PFAM: Adenosylcobinamide amidohydrolase.
  
     0.587
AGB16564.1
PFAM: Domain of unknown function (DUF3387); Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family.
   
    0.524
AGB17376.1
PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit.
   
    0.524
AGB16568.1
PFAM: Type I restriction modification DNA specificity domain.
  
    0.514
AGB17377.1
PFAM: Type I restriction modification DNA specificity domain; manually curated.
  
    0.514
AGB17562.1
PFAM: Uncharacterized conserved protein (DUF2249).
  
     0.479
AGB14705.1
Hypothetical protein.
       0.469
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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