Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB14874.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (302 aa)    
Predicted Functional Partners:
AGB16194.1
PFAM: Protein of unknown function (DUF354).
 
     0.616
AGB17434.1
PFAM: Protein of unknown function (DUF354).
 
     0.610
AGB17278.1
Putative ATP-grasp enzyme; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain.
 
     0.542
AGB16226.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
 
    0.512
AGB15248.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
 
    0.494
AGB16235.1
Hypothetical protein.
  
     0.494
AGB15923.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
 
    0.488
AGB17410.1
DNA/RNA helicase, superfamily I; PFAM: Nuclease-related domain.
  
 
   0.475
AGB16508.1
PFAM: Bacterial regulatory protein, arsR family; MarR family.
  
     0.471
AGB15246.1
Hypothetical protein.
 
     0.467
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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