STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB14879.1Putative membrane protein; PFAM: Protein of unknown function (DUF1616). (389 aa)    
Predicted Functional Partners:
AGB17447.1
Hypothetical protein.
 
    0.754
AGB14974.1
PFAM: Uncharacterised protein family (UPF0146); Belongs to the UPF0146 family.
  
     0.678
AGB15090.1
Putative Zn-finger protein.
  
     0.620
AGB16318.1
PFAM: Protein of unknown function (DUF447).
  
     0.615
AGB15440.1
RecJ-like exonuclease with DnaJ-type Zn-finger domain; PFAM: DHH family; OB-fold nucleic acid binding domain.
  
    0.590
AGB14837.1
PFAM: HTH DNA binding domain.
  
     0.583
AGB16143.1
PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
  
     0.573
AGB16292.1
PFAM: Uncharacterized protein conserved in archaea (DUF2150).
  
     0.563
AGB15061.1
PFAM: ATPase family associated with various cellular activities (AAA); Belongs to the AAA ATPase family.
  
     0.557
AGB16738.1
PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
  
     0.557
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.