Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
AGB15007.1Putative permease; PFAM: YHS domain; Predicted permease. (462 aa)    
Predicted Functional Partners:
AGB15008.1
PFAM: Predicted membrane protein (DUF2078).
       0.781
rpl24e
Ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.
      
 0.618
AGB17466.1
PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing.
 
  
 0.563
AGB16655.1
ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region.
  
     0.505
AGB15804.1
PFAM: Multicopper oxidase.
  
  
 0.486
AGB15817.1
PFAM: Multicopper oxidase.
  
  
 0.486
AGB17204.1
PFAM: Multicopper oxidase.
  
  
 0.486
AGB15077.1
PFAM: HNH endonuclease.
 
     0.485
AGB15009.1
Copper/silver-translocating P-type ATPase; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
    0.458
AGB15226.1
Hypothetical protein.
  
     0.450
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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