Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB15142.1Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase. (267 aa)    
Predicted Functional Partners:
AGB15428.1
NADH:ubiquinone oxidoreductase 49 kD subunit 7; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit.
   
 
 0.826
AGB15143.1
Mismatch repair ATPase (MutS family); This protein is involved in the repair of mismatches in DNA.
 
   0.685
AGB14706.1
Ankyrin repeat-containing protein; PFAM: Ankyrin repeat.
   
 0.619
AGB16489.1
PFAM: Protein kinase domain; FHA domain.
  
 0.570
AGB15141.1
L-asparaginase/GlutRNAGln amidotransferase subunit D; PFAM: Asparaginase.
     
 0.558
AGB16676.1
PFAM: Catalase; DJ-1/PfpI family; Catalase-related immune-responsive.
  
 0.543
AGB16491.1
PFAM: Protein kinase domain; FHA domain.
  
 0.520
AGB17426.1
DNA repair exonuclease; PFAM: Calcineurin-like phosphoesterase.
 
 
 0.489
AGB14728.1
Trypsin-like serine protease with C-terminal PDZ domain; PFAM: Trypsin.
 
 
 0.462
AGB15575.1
PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD.
   
 
 0.459
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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