Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB15145.1PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box. (603 aa)    
Predicted Functional Partners:
AGB15758.1
PFAM: Response regulator receiver domain; HalX domain.
 
 
   0.628
AGB15945.1
PFAM: Response regulator receiver domain; HalX domain.
 
 
   0.621
AGB14858.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.596
AGB14791.1
PFAM: Response regulator receiver domain; HalX domain.
 
 
   0.561
AGB15898.1
PFAM: Response regulator receiver domain.
 
 
   0.560
AGB16702.1
PFAM: Response regulator receiver domain.
 
 
   0.549
AGB14792.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box.
 
     0.535
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
  
 0.534
dnaK
Chaperone protein DnaK; Acts as a chaperone.
 
 
 0.529
AGB15143.1
Mismatch repair ATPase (MutS family); This protein is involved in the repair of mismatches in DNA.
 
 
 0.509
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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