Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB15171.1Na+-driven multidrug efflux pump; PFAM: MatE. (590 aa)    
Predicted Functional Partners:
AGB17140.1
PFAM: MatE; TIGRFAM: putative efflux protein, MATE family.
  
     0.729
gap
Glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II.
 
  
 0.619
tbp
TATA-box binding protein (TBP), component of TFIID and TFIIIB; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.
   
    0.579
AGB15417.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
    0.572
AGB17609.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
    0.572
AGB15815.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
   
  
 0.534
AGB15858.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
   
  
 0.534
AGB15170.1
PFAM: TAT (twin-arginine translocation) pathway signal sequence; Copper binding proteins, plastocyanin/azurin family.
       0.486
AGB15172.1
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NAD to NADH.
 
     0.467
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.