Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB15205.1Putative DHD superfamily phosphohydrolase. (431 aa)    
Predicted Functional Partners:
AGB15207.1
PFAM: Universal stress protein family.
 
     0.847
AGB15206.1
PFAM: Universal stress protein family.
       0.839
AGB15475.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
  
     0.745
AGB16787.1
Putative phosphatase; PFAM: haloacid dehalogenase-like hydrolase.
  
     0.701
AGB16040.1
PFAM: Membrane protein of unknown function DUF63.
  
     0.699
AGB17339.1
DEAD_2 domain-containing protein; PFAM: DEAD_2.
  
     0.698
AGB14919.1
DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase.
  
     0.694
AGB15350.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.693
fau-1
Protein of unknown function (DUF402); Probable RNase involved in rRNA stability through maturation and/or degradation of precursor rRNAs. Binds to RNA in loop regions with AU-rich sequences.
  
     0.682
AGB15450.1
Plastocyanin; PFAM: Copper binding proteins, plastocyanin/azurin family.
  
     0.652
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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