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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB15231.1Subtilisin-like serine protease; PFAM: PKD domain; Subtilase family. (615 aa)    
Predicted Functional Partners:
AGB16294.1
Subtilisin-like serine protease; PFAM: PKD domain; Subtilase family.
 
 
0.929
AGB15232.1
Subtilisin-like serine protease; PFAM: PKD domain; Subtilase family.
 
 
0.928
AGB17600.1
Subtilisin-like serine protease; PFAM: PA domain; Fn3-like domain (DUF1034); Subtilase family; Belongs to the peptidase S8 family.
 
  
 0.640
AGB15936.1
PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
 0.594
AGB17537.1
P-type ATPase, translocating; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
 0.594
AGB16156.1
Acyl dehydratase.
   
    0.542
AGB14805.1
TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.
 
 
 0.518
AGB17019.1
WD40-like repeat protein; PFAM: PQQ enzyme repeat; PKD domain; CARDB.
  
  
 0.491
AGB16489.1
PFAM: Protein kinase domain; FHA domain.
 
 0.490
dnaK
Chaperone protein DnaK; Acts as a chaperone.
  
 
 0.480
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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