Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB15285.1Putative metal-dependent phosphoesterase, PHP family. (264 aa)    
Predicted Functional Partners:
AGB15286.1
Conserved protein of unknown function BmrU; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family.
 
     0.666
AGB15287.1
Isopentenyldiphosphate isomerase; PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1.
       0.552
AGB14885.1
PFAM: HTH DNA binding domain.
  
     0.478
AGB16358.1
PFAM: HTH DNA binding domain.
  
     0.464
AGB15126.1
Hypothetical protein.
  
     0.459
AGB16235.1
Hypothetical protein.
  
     0.449
AGB15267.1
Hypothetical protein.
  
     0.420
AGB16517.1
PFAM: Gas vesicle synthesis protein GvpL/GvpF.
  
     0.406
AGB16872.1
Putative metal-dependent phosphoesterase, PHP family.
 
     0.403
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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