Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB15296.1PFAM: 5-formyltetrahydrofolate cyclo-ligase family. (260 aa)    
Predicted Functional Partners:
AGB15279.1
PFAM: AICARFT/IMPCHase bienzyme; Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent.
   
 0.961
folD
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
   
 0.960
AGB15295.1
Molybdopterin biosynthesis enzyme; PFAM: Probable molybdopterin binding domain.
  
    0.729
AGB16867.1
Putative membrane protein; PFAM: Rhomboid family; AN1-like Zinc finger.
  
  
 0.634
AGB16999.1
Putative membrane protein; PFAM: Rhomboid family.
  
  
 0.634
AGB16666.1
Dienelactone hydrolase-like enzyme; PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal.
 
     0.584
AGB15293.1
Hypothetical protein.
       0.551
AGB15294.1
PFAM: Transcriptional regulator PadR-like family.
       0.551
AGB15914.1
PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family.
 
  
 0.496
AGB17649.1
PFAM: Permease family.
 
     0.479
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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