Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB15380.1Hypothetical protein. (101 aa)    
Predicted Functional Partners:
AGB16014.1
Hypothetical protein; PFAM: PRC-barrel domain.
  
     0.735
AGB15829.1
Putative coiled-coil protein.
  
     0.707
AGB17135.1
Hypothetical protein.
  
     0.703
AGB14657.1
PFAM: Peptidase S24-like.
  
     0.701
AGB15975.1
PFAM: Protein of unknown function (DUF1119).
  
     0.700
AGB16625.1
Putative transcriptional regulator; PFAM: Helix-turn-helix.
  
     0.684
mptD
Hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family.
  
     0.681
AGB16473.1
PFAM: Uncharacterised protein family (UPF0179); Belongs to the UPF0179 family.
  
     0.677
AGB16689.1
PFAM: Uncharacterized protein conserved in archaea (DUF2240).
  
     0.673
AGB15438.1
Putative metal-dependent protease of the PAD1/JAB1 superfamily.
  
     0.669
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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