STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB15385.1ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein. (680 aa)    
Predicted Functional Partners:
AGB15386.1
Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.990
AGB15198.1
Putative archaeal flagellar protein D/E; PFAM: Flagella accessory protein C (FlaC); Archaeal flagella protein.
  
  
 0.961
AGB15193.1
Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.895
AGB15387.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
   
   0.847
AGB15195.1
Putative ATPase involved in flagella biogenesis; PFAM: KaiC.
 
  
 0.836
AGB15384.1
Hypothetical protein.
       0.735
AGB15196.1
Putative archaeal flagellar protein G; PFAM: Archaebacterial flagellin.
  
  
 0.720
AGB17305.1
Putative archaeal flagellar protein G; PFAM: Archaebacterial flagellin.
  
  
 0.720
AGB15911.1
Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.719
AGB15199.1
Archaeal flagellin-like protein; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
 
  
 0.688
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.