Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB15386.1Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain. (700 aa)    
Predicted Functional Partners:
AGB15385.1
ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.
 
  
 0.990
AGB15194.1
ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.
 
  
 0.841
AGB15387.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
       0.835
AGB15912.1
ATPase, type IV secretory pathway VirB11 component like protein; PFAM: Type II/IV secretion system protein.
 
  
 0.797
AGB14742.1
Hypothetical protein; PFAM: PRC-barrel domain.
  
    0.738
AGB15384.1
Hypothetical protein.
       0.730
AGB15118.1
PFAM: Protein of unknown function (DUF552).
  
     0.716
AGB16777.1
Putative transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family.
  
     0.714
AGB15370.1
Putative membrane protein; PFAM: Transmembrane exosortase (Exosortase_EpsH).
  
     0.708
secE
Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.682
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.