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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB15417.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (360 aa)    
Predicted Functional Partners:
AGB15416.1
Hypothetical protein.
 
  
 0.921
AGB17549.1
Nitrous oxidase accessory protein; PFAM: NosL.
 
 
 0.786
AGB17355.1
Subtilisin-like serine protease; PFAM: Subtilase family; Belongs to the peptidase S8 family.
 
 
 0.696
AGB17610.1
Hypothetical protein.
 
  
 0.694
AGB17351.1
PFAM: Transcriptional regulator PadR-like family.
  
    0.685
rpl2
Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
  
 
   0.555
AGB15171.1
Na+-driven multidrug efflux pump; PFAM: MatE.
  
    0.550
AGB15328.1
PFAM: MatE; TIGRFAM: putative efflux protein, MATE family.
  
    0.550
AGB15501.1
PFAM: MatE; TIGRFAM: putative efflux protein, MATE family.
  
    0.550
AGB15720.1
PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; manually curated.
  
    0.550
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.