Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB15447.1Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; PFAM: Phospholipase D Active site motif. (667 aa)    
Predicted Functional Partners:
AGB15448.1
PFAM: PBS lyase HEAT-like repeat.
       0.793
AGB14659.1
PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain.
   
 0.784
AGB15446.1
Hypothetical protein.
       0.610
AGB17260.1
Putative metal-binding protein.
  
     0.589
AGB15449.1
Phosphatidylserine synthase; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.588
argS
arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
   
 0.538
AGB15380.1
Hypothetical protein.
  
     0.530
AGB17162.1
PFAM: ATP synthase subunit C.
 
  
 0.509
AGB14706.1
Ankyrin repeat-containing protein; PFAM: Ankyrin repeat.
  
 0.496
AGB14974.1
PFAM: Uncharacterised protein family (UPF0146); Belongs to the UPF0146 family.
  
     0.480
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.