STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB15496.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
AGB15495.1
PFAM: Protein of unknown function (DUF2797).
       0.584
AGB16235.1
Hypothetical protein.
  
     0.579
AGB15267.1
Hypothetical protein.
  
     0.554
AGB17137.1
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase; PFAM: Rieske [2Fe-2S] domain.
  
     0.542
AGB17321.1
PFAM: Arylsulfotransferase (ASST).
  
     0.452
AGB15245.1
Hypothetical protein.
  
     0.436
AGB15268.1
Hypothetical protein; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase.
  
     0.417
AGB16193.1
Site-specific recombinase XerD.
  
     0.403
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.