Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGB15502.1Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily. (425 aa)    
Predicted Functional Partners:
AGB16273.1
PFAM: Acetyltransferase (GNAT) family.
  
 
   0.703
AGB17571.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: Redoxin.
  
     0.674
AGB14668.1
DNA helicase, Rad3; PFAM: DEAD_2.
 
     0.627
AGB15716.1
PFAM: DoxX.
  
 
   0.536
AGB14931.1
Acetyltransferase, ribosomal protein N-acetylase.
 
    0.502
AGB15381.1
Hypothetical protein.
  
     0.502
AGB15911.1
Archaeal flagella assembly protein J; PFAM: Bacterial type II secretion system protein F domain.
  
     0.498
AGB16980.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
  
     0.487
AGB16040.1
PFAM: Membrane protein of unknown function DUF63.
 
     0.485
AGB17412.1
Acetyltransferase, ribosomal protein N-acetylase.
 
    0.478
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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