Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGB15511.1PFAM: Uncharacterized conserved protein (DUF2267). (153 aa)    
Predicted Functional Partners:
AGB16222.1
Hypothetical protein.
  
     0.538
AGB17085.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
  
     0.499
AGB17278.1
Putative ATP-grasp enzyme; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain.
  
     0.496
AGB17137.1
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase; PFAM: Rieske [2Fe-2S] domain.
  
     0.485
AGB16235.1
Hypothetical protein.
  
     0.478
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
      
 0.469
AGB16193.1
Site-specific recombinase XerD.
  
     0.449
AGB16243.1
PFAM: Protein of unknown function (DUF2910).
  
     0.441
AGB14691.1
Sulfur transfer protein involved in thiamine biosynthesis.
      
 0.438
AGB15349.1
PFAM: ThiS family; TIGRFAM: MoaD family protein, archaeal.
      
 0.438
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.