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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB15556.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (329 aa)    
Predicted Functional Partners:
AGB15557.1
Hypothetical protein.
 
 
 0.888
AGB17549.1
Nitrous oxidase accessory protein; PFAM: NosL.
  
 
 0.750
AGB15239.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
    
0.693
AGB17355.1
Subtilisin-like serine protease; PFAM: Subtilase family; Belongs to the peptidase S8 family.
  
 
 0.650
AGB16916.1
Hypothetical protein.
 
 
 0.575
AGB17478.1
Hypothetical protein.
 
 
 0.569
AGB17555.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 
 0.526
AGB15127.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 
 0.518
AGB14839.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
 
 0.511
AGB14805.1
TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.
 
 0.495
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.