Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGB15556.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (329 aa)    
Predicted Functional Partners:
AGB15557.1
Hypothetical protein.
 
   0.877
AGB16916.1
Hypothetical protein.
 
   0.698
AGB15239.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
    
0.692
AGB17355.1
Subtilisin-like serine protease; PFAM: Subtilase family; Belongs to the peptidase S8 family.
  
 
 0.597
AGB14805.1
TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.
 
 0.563
AGB17236.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
 
 0.559
AGB17478.1
Hypothetical protein.
 
   0.526
AGB16814.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
 
  
 0.517
AGB17555.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
   0.479
AGB15127.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
   0.470
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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