STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB15557.1Hypothetical protein. (288 aa)    
Predicted Functional Partners:
AGB17549.1
Nitrous oxidase accessory protein; PFAM: NosL.
 
 
 0.929
AGB15556.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.888
AGB17355.1
Subtilisin-like serine protease; PFAM: Subtilase family; Belongs to the peptidase S8 family.
  
 
 0.689
AGB17552.1
Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
 
 0.659
AGB15662.1
NosL; PFAM: NosL.
 
 
 0.607
AGB14840.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.535
AGB17554.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.535
AGB14692.1
Mn2+/Fe2_ transporter, NRAMP family; PFAM: Natural resistance-associated macrophage protein.
 
     0.529
AGB17477.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.517
AGB16915.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.511
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.