Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGB15633.1Glycosyltransferase; PFAM: Glycosyl transferases group 1. (331 aa)    
Predicted Functional Partners:
AGB15631.1
Hypothetical protein.
 
     0.532
AGB15632.1
PFAM: NAD dependent epimerase/dehydratase family.
 
    0.514
AGB15634.1
UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; manually curated.
 
    0.504
AGB14805.1
TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.
 
 
 0.488
AGB15630.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.485
AGB16666.1
Dienelactone hydrolase-like enzyme; PFAM: BAAT / Acyl-CoA thioester hydrolase C terminal.
   
 
 0.439
AGB15414.1
Putative Fe-S protein; PFAM: MOSC N-terminal beta barrel domain; MOSC domain.
  
    0.426
AGB14875.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
 
    0.412
AGB15248.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
 
    0.404
AGB17094.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
 
    0.404
Your Current Organism:
Halovivax ruber
NCBI taxonomy Id: 797302
Other names: H. ruber XH-70, Halovivax ruber JCM 13892, Halovivax ruber XH-70, Halovivax ruber str. XH-70, Halovivax ruber strain XH-70
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